BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C07SP1|AL427735
(645 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1593 1226 0.0
>3x_Contig1593
Length = 10902
Score = 1226 bits (618), Expect = 0.0
Identities = 638/644 (99%), Gaps = 1/644 (0%)
Strand = Plus / Minus
Query: 1 gatcgccattnatttacagcgttaataatatctgttgcgttcccactgctcacgagcaaa 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 gatcgccatt-atttacagcgttaataatatctgttgcgttcccactgctcacgagcaaa 882
Query: 61 agcgatacagntctcgatcccaactccgagttgttattgatcaattcatgcagctgtgtc 120
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 agcgatagcagtctcgatcccaactccgagttgttattgatcaattcatgcagctgtgtc 822
Query: 121 gataaatctgatcccggtttcccaaactgagcaactgcgtttgctgtgtcctgttgtcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gataaatctgatcccggtttcccaaactgagcaactgcgtttgctgtgtcctgttgtcga 762
Query: 181 tcgttcggtaccgataccgaaactttcctggtctttccatcagctttggacactgtataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tcgttcggtaccgataccgaaactttcctggtctttccatcagctttggacactgtataa 702
Query: 241 ttttgagaaacagaacctgtagcctggccagaattcgtctcgtcagaagttgtgactggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ttttgagaaacagaacctgtagcctggccagaattcgtctcgtcagaagttgtgactggc 642
Query: 301 tcagtcacatcaactcctgactcagcttcagtctgggcctcggtctgggcttgaacttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 tcagtcacatcaactcctgactcagcttcagtctgggcctcggtctgggcttgaacttgt 582
Query: 361 tctttcaatcctcgtagcaattcattaagtttagtagtagacggcgaggtcatattttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tctttcaatcctcgtagcaattcattaagtttagtagtagacggcgaggtcatattttca 522
Query: 421 gtgggcatacttaaccttccgtctccagtggttcctttcatttgctccaagccagttgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtgggcatacttaaccttccgtctccagtggttcctttcatttgctccaagccagttgta 462
Query: 481 gccatcctcaaaactccccttttaataacactatgagaaactattaagcaatgactcccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gccatcctcaaaactccccttttaataacactatgagaaactattaagcaatgactcccc 402
Query: 541 aaggtccaaaaagtatatgtccaacgattaaacgttcacaaaacgaaaccagttatagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aaggtccaaaaagtatatgtccaacgattaaacgttcacaaaacgaaaccagttatagcc 342
Query: 601 agcacttgctgatccggacgggtataaagtatatatatatatat 644
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 341 agcacttgctgatccggacgggtataaagnatatatatatatat 298
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7186
Number of Sequences: 1807
Number of extensions: 7186
Number of successful extensions: 1455
Number of sequences better than 1.0e-20: 1
length of query: 645
length of database: 10,358,551
effective HSP length: 16
effective length of query: 629
effective length of database: 10,329,639
effective search space: 6497342931
effective search space used: 6497342931
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)